STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP21Ubiquitin specific peptidase 21. (565 aa)    
Predicted Functional Partners:
RIPK1
Receptor interacting serine/threonine kinase 1.
    
 0.985
ENSNVIP00000008604
annotation not available
   
 0.927
GATA3
GATA binding protein 3.
    
 0.912
AURKA
Aurora kinase A.
    
 
 0.843
ENSNVIP00000002157
annotation not available
    
 
 0.842
ENSNVIP00000002632
annotation not available
    
 
 0.842
FUCA1
alpha-L-fucosidase 1.
    
   0.833
ENSNVIP00000003240
annotation not available
   
 0.811
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.811
RPS27A
Ribosomal protein S27a.
    
 0.807
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.