STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MDN1Midasin AAA ATPase 1. (5529 aa)    
Predicted Functional Partners:
ENSNVIP00000009279
WD repeat domain 12.
   
 0.933
NLE1
Notchless homolog 1.
   
 
 0.927
UTP20
UTP20 small subunit processome component.
   
  
 0.917
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.868
SART3
Spliceosome associated factor 3, U4/U6 recycling protein.
   
   0.860
GTPBP4
GTP binding protein 4.
   
 
 0.850
GNL2
G protein nucleolar 2.
   
 
 0.849
ENSNVIP00000009026
annotation not available
   
 
 0.819
ENSNVIP00000003236
annotation not available
   
 0.814
SDAD1
SDA1 domain containing 1.
   
 
 0.810
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.