STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM227AFamily with sequence similarity 227 member A. (569 aa)    
Predicted Functional Partners:
TMEM25
Transmembrane protein 25.
      
 0.600
SMPDL3A
Sphingomyelin phosphodiesterase acid like 3A.
      
 0.570
MFSD2B
Major facilitator superfamily domain containing 2B.
      
 0.509
ENSNVIP00000024357
annotation not available
      
 0.505
RBBP9
RB binding protein 9, serine hydrolase.
      
 0.502
ENSNVIP00000024323
annotation not available
      
 0.430
ENSNVIP00000017670
Rho family GTPase 2.
      
 0.429
CMBL
Carboxymethylenebutenolidase homolog.
      
 0.429
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.