Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000002171annotation not available (85 aa)    
Predicted Functional Partners:
ENSNVIP00000013359
TNF receptor associated factor 6.
    
 0.952
RNF168
Ring finger protein 168.
    
 0.941
RNF8
Ring finger protein 8.
   
 0.933
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
   
 0.931
ENSNVIP00000008604
annotation not available
   
 0.929
ENSNVIP00000018559
annotation not available
   
 0.928
HLTF
Helicase like transcription factor.
    
 0.924
RBX1
Ring-box 1.
   
 0.922
OTUB1
OTU deubiquitinase, ubiquitin aldehyde binding 1.
   
 0.922
MAP3K7
Mitogen-activated protein kinase kinase kinase 7.
    
 0.920
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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