STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMT12tRNA methyltransferase 12 homolog. (439 aa)    
Predicted Functional Partners:
ENSNVIP00000000944
annotation not available
   
 
 0.814
ENSNVIP00000013035
annotation not available
   
 
 0.814
ENSNVIP00000025137
annotation not available
   
 
 0.814
TYW3
tRNA-yW synthesizing protein 3 homolog.
  
 
 0.645
TYW5
tRNA-yW synthesizing protein 5.
 
    
 0.641
WDYHV1
WDYHV motif containing 1.
   
  
 0.617
ENSNVIP00000022840
annotation not available
   
 
 0.610
ZCCHC4
Zinc finger CCHC-type containing 4.
   
  
 0.592
TRMO
tRNA methyltransferase O.
   
  
 0.556
METTL5
Methyltransferase like 5.
      
 0.540
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.