STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLOD3Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3. (742 aa)    
Predicted Functional Partners:
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
  0.992
EHMT2
Euchromatic histone lysine methyltransferase 2.
    
  0.968
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
  0.963
COLGALT2
Collagen beta(1-O)galactosyltransferase 2.
   
 0.937
COLGALT1
Collagen beta(1-O)galactosyltransferase 1.
   
 0.937
CERCAM
Cerebral endothelial cell adhesion molecule.
   
 0.924
COL21A1
Collagen type XXI alpha 1 chain.
   
 0.896
EHMT1
Euchromatic histone lysine methyltransferase 1.
    
  0.884
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
  0.882
ENSNVIP00000031495
annotation not available
     
  0.882
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.