Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIM3Tripartite motif containing 3. (744 aa)    
Predicted Functional Partners:
TRIM2
Tripartite motif containing 2.
   
   0.880
ACTN4
Actinin alpha 4.
   
 
 0.763
ACTN1
Actinin alpha 1.
   
 
 0.763
HGS
Hepatocyte growth factor-regulated tyrosine kinase substrate.
    
 
 0.746
ENSNVIP00000008604
annotation not available
    
  0.692
ENSNVIP00000030368
Ubiquitin conjugating enzyme E2 D1.
    
  0.680
LRRC8E
Leucine rich repeat containing 8 VRAC subunit E.
    
 0.666
ESR1
Estrogen receptor 1.
    
 0.655
KPNA4
Karyopherin subunit alpha 4.
    
 
 0.647
MAPT
Microtubule associated protein tau.
   
   0.642
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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