Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFAP1L1Actin filament associated protein 1 like 1. (768 aa)    
Predicted Functional Partners:
GADD45G
Growth arrest and DNA damage inducible gamma.
    
   0.867
VPS53
VPS53 subunit of GARP complex.
      
 0.722
SYT10
Synaptotagmin 10.
      
 0.677
ADGRF5
Adhesion G protein-coupled receptor F5.
   
    0.654
RPH3AL
Rabphilin 3A like (without C2 domains).
      
 0.650
GEMIN4
Gem nuclear organelle associated protein 4.
      
 0.644
ENSNVIP00000002227
annotation not available
    
   0.628
PCYOX1L
Prenylcysteine oxidase 1 like.
      
 0.566
GRPEL2
GrpE like 2, mitochondrial.
      
 0.565
CNTN6
Contactin 6.
      
 0.565
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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