STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPOXProtoporphyrinogen oxidase. (477 aa)    
Predicted Functional Partners:
FECH
Ferrochelatase.
  
 0.994
ENSNVIP00000024078
Uroporphyrinogen decarboxylase.
  
 
 0.992
CPOX
Coproporphyrinogen oxidase.
  
 
 0.975
ENDOV
Endonuclease V.
  
 
 0.942
UROS
Uroporphyrinogen III synthase.
  
 
 0.832
ITIH5
Inter-alpha-trypsin inhibitor heavy chain 5.
   
 
 0.816
ALAD
Aminolevulinate dehydratase.
  
 
 0.814
ENSNVIP00000004356
Hydroxymethylbilane synthase.
  
  
 0.800
GALE
UDP-galactose-4-epimerase.
    
 0.798
FH
Fumarate hydratase.
     
  0.732
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.