STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALMS1ALMS1 centrosome and basal body associated protein. (3522 aa)    
Predicted Functional Partners:
PLK1
Polo like kinase 1.
    
  0.937
CEP290
Centrosomal protein 290.
   
 0.785
CEP192
Centrosomal protein 192.
   
 0.754
BRCA2
BRCA2 DNA repair associated.
   
 
 0.739
PLK4
Polo like kinase 4.
    
 0.731
CEP164
Centrosomal protein 164.
     
 0.696
QRICH2
Glutamine rich 2.
    
 0.685
CMYA5
Cardiomyopathy associated 5.
  
 
 0.670
BORA
BORA aurora kinase A activator.
     
  0.662
HAUS8
HAUS augmin like complex subunit 8.
  
  
  0.646
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.