Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEMA3ESemaphorin 3E. (775 aa)    
Predicted Functional Partners:
PLXND1
Plexin D1.
    
 0.990
NRP1
Neuropilin 1.
    
 0.945
PLXNA2
Plexin A2.
    
 0.853
PLXNC1
Plexin C1.
    
 0.757
DOK4
Docking protein 4.
      
 0.754
COL5A2
Collagen type V alpha 2 chain.
      
 0.753
EFR3B
EFR3 homolog B.
      
 0.748
ENSNVIP00000029529
Plexin A4.
    
 0.737
SEMA3F
Semaphorin 3F.
     
  0.726
PLXNA3
Plexin A3.
    
 0.722
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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