Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEMA3ASemaphorin 3A. (772 aa)    
Predicted Functional Partners:
NRP1
Neuropilin 1.
    
 0.998
PLXNA2
Plexin A2.
    
 0.953
ENSNVIP00000029529
Plexin A4.
    
 0.953
PLXNA3
Plexin A3.
    
 0.953
PLXNA1
Plexin A1.
    
 0.927
PLXND1
Plexin D1.
    
 0.882
NRP2
Neuropilin 2.
    
 
 0.808
PLXNC1
Plexin C1.
    
 0.762
CRMP1
Collapsin response mediator protein 1.
     
 0.730
ENSNVIP00000002161
Cyclin dependent kinase 5.
     
 0.669
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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