Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB27ARAB27A, member RAS oncogene family. (221 aa)    
Predicted Functional Partners:
ENSNVIP00000003854
annotation not available
   
 0.977
SYTL1
Synaptotagmin like 1.
   
 0.950
SYTL5
Synaptotagmin like 5.
    
 0.935
ENSNVIP00000012366
Synaptotagmin like 3.
    
 0.933
SYTL4
Synaptotagmin like 4.
    
 0.932
CD63
CD63 molecule.
     
 0.856
MYO5A
Myosin VA.
    
 0.832
MYO5C
Myosin VC.
    
 0.793
ENSNVIP00000025266
annotation not available
    
 0.781
MYRIP
Myosin VIIA and Rab interacting protein.
    
 0.781
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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