Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NID2Nidogen 2. (1467 aa)    
Predicted Functional Partners:
NID1
Nidogen 1.
   
 0.985
LAMA4
Laminin subunit alpha 4.
   
 0.939
HSPG2
Heparan sulfate proteoglycan 2.
   
 0.926
LAMC1
Laminin subunit gamma 1.
   
 0.916
LAMC3
Laminin subunit gamma 3.
   
 0.856
LAMB1
Laminin subunit beta 1.
   
 0.813
AGRN
Agrin.
   
 0.777
FBLN1
Fibulin 1.
   
 0.736
RIN1
Ras and Rab interactor 1.
    
   0.728
LAMA3
Laminin subunit alpha 3.
   
 0.726
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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