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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNFT1Ring finger protein, transmembrane 1. (433 aa)    
Predicted Functional Partners:
LAPTM4A
Lysosomal protein transmembrane 4 alpha.
      
 0.564
CGRRF1
Cell growth regulator with ring finger domain 1.
      
 0.552
RNF170
Ring finger protein 170.
      
 0.545
RAPGEFL1
Rap guanine nucleotide exchange factor like 1.
      
 0.527
ENSNVIP00000027645
Family with sequence similarity 118 member A.
      
 0.525
ACOT9
acyl-CoA thioesterase 9.
      
 0.520
ATP8B2
ATPase phospholipid transporting 8B2.
      
 0.513
RNF5
Ring finger protein 5.
      
 0.477
ENSNVIP00000017382
annotation not available
      
 0.476
ENSNVIP00000017401
annotation not available
      
 0.476
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.