Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTGDRProstaglandin D2 receptor. (358 aa)    
Predicted Functional Partners:
ENSNVIP00000013975
Ankyrin repeat domain 13C.
    
 
 0.794
PTGDR2
Prostaglandin D2 receptor 2.
    
 
 0.599
GNG2
G protein subunit gamma 2.
    
 0.585
ZNF641
Zinc finger protein 641.
    
 
 0.548
GNG4
G protein subunit gamma 4.
    
 0.544
ENSNVIP00000015757
annotation not available
    
 
 0.523
AGTRAP
Angiotensin II receptor associated protein.
    
 
 0.494
PDS5B
PDS5 cohesin associated factor B.
      
 0.494
TBC1D21
TBC1 domain family member 21.
      
 0.472
PCYOX1
Prenylcysteine oxidase 1.
      
 0.466
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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