Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEMA3DSemaphorin 3D. (777 aa)    
Predicted Functional Partners:
NRP1
Neuropilin 1.
    
 0.940
SEMA3G
Semaphorin 3G.
     
  0.721
SEMA3F
Semaphorin 3F.
     
  0.721
PLXNA1
Plexin A1.
    
 0.655
SEMA3C
Semaphorin 3C.
    
   0.647
PLXND1
Plexin D1.
    
 0.607
METTL4
Methyltransferase like 4.
      
 0.562
TFEC
Transcription factor EC.
      
 0.557
SEMA3E
Semaphorin 3E.
     
  0.536
PLXNA3
Plexin A3.
    
 0.535
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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