Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LSM8LSM8 homolog, U6 small nuclear RNA associated. (96 aa)    
Predicted Functional Partners:
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.999
ENSNVIP00000011129
annotation not available
   
 0.999
LSM5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated.
   
 0.999
ENSNVIP00000022872
annotation not available
   
 0.998
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.992
ENSNVIP00000006774
annotation not available
   
 0.990
ENSNVIP00000012799
annotation not available
   
 0.990
ENSNVIP00000014179
annotation not available
   
 0.990
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.980
ENSNVIP00000027125
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.978
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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