Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COL26A1Collagen type XXVI alpha 1 chain. (423 aa)    
Predicted Functional Partners:
SERPINH1
Serpin family H member 1.
    
 0.611
COL25A1
Collagen type XXV alpha 1 chain.
     
 0.604
ENSNVIP00000024058
Kelch like family member 25.
    
   0.577
MRPL45
Mitochondrial ribosomal protein L45.
      
 0.548
ENSNVIP00000028723
Nucleoporin 43.
     
 0.495
ZFP90
ZFP90 zinc finger protein.
    
 0.490
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
      
 0.476
ENSNVIP00000003767
annotation not available
     
 0.423
CRTAP
Cartilage associated protein.
    
 0.423
P3H4
Prolyl 3-hydroxylase family member 4 (inactive).
    
 0.423
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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