STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMYD5SMYD family member 5. (417 aa)    
Predicted Functional Partners:
SMYD4
SET and MYND domain containing 4.
      
 0.753
TP53
Tumor protein p53.
    
 0.715
KMT2E
Lysine methyltransferase 2E.
    
 0.658
ENSNVIP00000025834
WW domain containing oxidoreductase.
   
 
 0.635
SETD2
SET domain containing 2, histone lysine methyltransferase.
     
 0.616
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
    
 0.608
SETD1A
SET domain containing 1A, histone lysine methyltransferase.
    
 0.608
ENSNVIP00000004335
SET and MYND domain containing 3.
      
 0.607
SMYD1
SET and MYND domain containing 1.
      
 0.554
SETD3
SET domain containing 3, actin histidine methyltransferase.
   
 
 0.552
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.