Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THBS4Thrombospondin 4. (964 aa)    
Predicted Functional Partners:
COMP
Cartilage oligomeric matrix protein.
   
 
 0.967
CD47
CD47 molecule.
   
 0.909
ITGB1
Integrin subunit beta 1.
    
 0.896
ENSNVIP00000001479
CD36 molecule.
    
 0.893
ENSNVIP00000030081
annotation not available
    
 0.893
ITGB8
Integrin subunit beta 8.
    
 0.890
SDC1
Syndecan 1.
    
 0.889
ITGAV
Integrin subunit alpha V.
   
 0.886
ITGA6
Integrin subunit alpha 6.
   
 0.886
ITGA2B
Integrin subunit alpha 2b.
   
 0.886
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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