STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VMP1Vacuole membrane protein 1. (447 aa)    
Predicted Functional Partners:
ATG13
Autophagy related 13.
     
 0.954
BECN2
Beclin 2.
   
 0.933
ENSNVIP00000017184
annotation not available
   
 0.933
TP53INP2
Tumor protein p53 inducible nuclear protein 2.
     
 0.911
TMEM64
Transmembrane protein 64.
    
 
 0.882
ENSNVIP00000013959
Transmembrane protein 41B.
    
 
 0.790
TP53INP1
Tumor protein p53 inducible nuclear protein 1.
     
 0.772
ATG2A
Autophagy related 2A.
      
 0.727
EI24
EI24 autophagy associated transmembrane protein.
      
 0.722
EPG5
Ectopic P-granules autophagy protein 5 homolog.
      
 0.684
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.