STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPGS1Tubulin polyglutamylase complex subunit 1. (291 aa)    
Predicted Functional Partners:
ENSNVIP00000002898
Leucine rich repeat containing 49.
    
 0.982
TTLL1
Tubulin tyrosine ligase like 1.
    
 0.981
ENSNVIP00000030831
annotation not available
    
 0.978
ENSNVIP00000015159
Chromosome 11 open reading frame 49.
    
 
 0.969
ENSNVIP00000017124
annotation not available
    
 0.832
ENSNVIP00000023211
annotation not available
    
 0.832
ENSNVIP00000027192
annotation not available
    
 0.832
ENSNVIP00000015742
KIAA1841.
    
   0.824
ENSNVIP00000017480
TBC1 domain family member 19.
    
   0.824
TTC13
Tetratricopeptide repeat domain 13.
      
 0.754
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.