Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PICK1Protein interacting with PRKCA 1. (417 aa)    
Predicted Functional Partners:
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
    
 0.992
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
    
 0.964
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
    
 0.960
ENSNVIP00000018608
annotation not available
    
 0.951
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
    
 0.943
NHSL2
NHS like 2.
    
   0.937
GRIP1
Glutamate receptor interacting protein 1.
    
 0.898
PRKCA
Protein kinase C alpha.
    
 0.839
ATP6AP1
ATPase H+ transporting accessory protein 1.
    
 
 0.832
PRKCB
Protein kinase C beta.
    
 0.830
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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