Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CALCOCO1Calcium binding and coiled-coil domain 1. (692 aa)    
Predicted Functional Partners:
CRLF3
Cytokine receptor like factor 3.
      
 0.727
ARNT2
Aryl hydrocarbon receptor nuclear translocator 2.
    
   0.670
ARNT
Aryl hydrocarbon receptor nuclear translocator.
    
   0.670
EP300
E1A binding protein p300.
    
 
 0.648
NDC80
NDC80 kinetochore complex component.
   
 
 0.640
ENSNVIP00000000520
PHD finger protein 5A.
      
 0.636
CA10
Carbonic anhydrase 10.
    
   0.628
NBR1
NBR1 autophagy cargo receptor.
    
 0.593
TP53BP1
Tumor protein p53 binding protein 1.
    
 0.579
CCPG1
Cell cycle progression 1.
   
 0.545
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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