Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MAP1LC3CMicrotubule associated protein 1 light chain 3 gamma. (137 aa)    
Predicted Functional Partners:
CALCOCO2
Calcium binding and coiled-coil domain 2.
   
 0.995
SQSTM1
Sequestosome 1.
   
 0.994
ENSNVIP00000023681
Autophagy related 4B cysteine peptidase.
   
 0.992
ATG7
Autophagy related 7.
   
 0.990
PLEKHM1
Pleckstrin homology and RUN domain containing M1.
    
 0.982
ENSNVIP00000025407
Autophagy related 4A cysteine peptidase.
   
 0.979
NBR1
NBR1 autophagy cargo receptor.
   
 0.966
ATG12
Autophagy related 12.
   
 0.952
ATG5
Autophagy related 5.
    
 0.948
ATG14
Autophagy related 14.
    
 0.945
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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