Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZMAT1Zinc finger matrin-type 1. (598 aa)    
Predicted Functional Partners:
DRGX
Dorsal root ganglia homeobox.
      
 0.707
GSC2
Goosecoid homeobox 2.
      
 0.615
ARID4A
AT-rich interaction domain 4A.
      
 0.488
PTPRA
Protein tyrosine phosphatase receptor type A.
      
 0.485
ITFG1
Integrin alpha FG-GAP repeat containing 1.
      
 0.481
VSX1
Visual system homeobox 1.
      
 0.471
UNCX
UNC homeobox.
      
 0.424
ENSNVIP00000020672
annotation not available
      
 0.416
DMTF1
Cyclin D binding myb like transcription factor 1.
      
 0.401
FOXB2
Forkhead box B2.
      
 0.401
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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