STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBD6methyl-CpG binding domain protein 6. (1005 aa)    
Predicted Functional Partners:
MBD5
methyl-CpG binding domain protein 5.
     
 0.631
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.628
RANBP2
RAN binding protein 2.
    
 0.432
ACRBP
Acrosin binding protein.
  
     0.427
LYPD5
LY6/PLAUR domain containing 5.
  
     0.420
CSF2RB
Colony stimulating factor 2 receptor beta common subunit.
  
     0.418
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.