STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MBD1methyl-CpG binding domain protein 1. (656 aa)    
Predicted Functional Partners:
ATF7IP
Activating transcription factor 7 interacting protein.
    
 0.874
CHAF1A
Chromatin assembly factor 1 subunit A.
    
 
 0.782
ENSNVIP00000007424
Cilia and flagella associated protein 52.
   
 0.756
CFAP45
Cilia and flagella associated protein 45.
   
 0.749
CFAP161
Cilia and flagella associated protein 161.
   
 0.749
TEKT3
Tektin 3.
   
 
 0.745
MNS1
Meiosis specific nuclear structural 1.
   
 0.744
ENSNVIP00000018312
Cilia and flagella associated protein 20.
    
 
 0.744
ENSNVIP00000015558
Tektin 2.
   
 
 0.735
EFHC1
EF-hand domain containing 1.
   
 
 0.718
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.