Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SMARCA1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1. (1070 aa)    
Predicted Functional Partners:
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
   
 0.985
RSF1
Remodeling and spacing factor 1.
   
 0.984
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
   
 0.955
POLE3
DNA polymerase epsilon 3, accessory subunit.
    
 0.948
BPTF
Bromodomain PHD finger transcription factor.
   
 0.935
CECR2
CECR2 histone acetyl-lysine reader.
    
 0.914
ENSNVIP00000020118
annotation not available
   
 
 0.894
ENSNVIP00000000652
annotation not available
   
 0.875
ENSNVIP00000000675
annotation not available
   
 0.875
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.864
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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