Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSMA6Proteasome 20S subunit alpha 6. (251 aa)    
Predicted Functional Partners:
PSMB1
Proteasome 20S subunit beta 1.
   
 0.999
PSMB3
Proteasome 20S subunit beta 3.
   
 0.999
PSMA4
Proteasome 20S subunit alpha 4.
   
0.999
PSMA2
Proteasome 20S subunit alpha 2.
   
0.999
PSMB4
Proteasome 20S subunit beta 4.
   
 0.999
PSMB9
Proteasome 20S subunit beta 9.
   
 0.998
PSMD14
Proteasome 26S subunit, non-ATPase 14.
   
 0.998
PSMC4
Proteasome 26S subunit, ATPase 4.
  
 0.998
PSMB6
Proteasome 20S subunit beta 6.
   
 0.998
PSMD12
Proteasome 26S subunit, non-ATPase 12.
   
 0.997
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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