Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PKHD1L1PKHD1 like 1. (4172 aa)    
Predicted Functional Partners:
CDCP2
CUB domain containing protein 2.
    
 0.635
TSPAN11
Tetraspanin 11.
     
 0.581
FAM186A
Family with sequence similarity 186 member A.
      
 0.557
LRRC20
Leucine rich repeat containing 20.
     
 0.549
ENSNVIP00000022390
Intraflagellar transport 81.
      
 0.547
ENSNVIP00000018978
Nucleolar protein 10.
      
 0.515
CD151
CD151 molecule (Raph blood group).
     
 0.499
ENSNVIP00000009567
KIAA0513.
   
  
 0.492
ITGAL
Integrin subunit alpha L.
    
 0.489
BTNL9
Butyrophilin like 9.
      
 0.488
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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