Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYT1Synaptotagmin 1. (422 aa)    
Predicted Functional Partners:
SNAP25
Synaptosome associated protein 25.
   
 0.971
ENSNVIP00000006151
annotation not available
   
 0.968
STON2
Stonin 2.
   
 0.943
VAMP1
Vesicle associated membrane protein 1.
   
 0.910
STX1A
Syntaxin 1A.
   
 0.887
STX1B
Syntaxin 1B.
   
 0.887
VAMP3
Vesicle associated membrane protein 3.
   
 0.865
SYT11
Synaptotagmin 11.
   
 0.859
SLC18A3
Solute carrier family 18 member A3.
     
 0.856
ENSNVIP00000027506
Synaptotagmin 4.
   
 0.854
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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