Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEP170Centrosomal protein 170. (1595 aa)    
Predicted Functional Partners:
ENSNVIP00000024133
Coiled-coil domain containing 68.
    
 0.964
CCDC120
Coiled-coil domain containing 120.
    
 0.918
WDR62
WD repeat domain 62.
    
 
 0.914
HERC2
HECT and RLD domain containing E3 ubiquitin protein ligase 2.
    
 
 0.875
NIN
Ninein.
    
 0.833
MAPT
Microtubule associated protein tau.
    
   0.828
CEP164
Centrosomal protein 164.
    
 0.763
MAPKBP1
Mitogen-activated protein kinase binding protein 1.
    
 
 0.752
CEP128
Centrosomal protein 128.
     
 0.740
YWHAQ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta.
    
  0.732
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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