STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HOXC6Homeobox C6. (235 aa)    
Predicted Functional Partners:
HOXC5
Homeobox C5.
   
 
 0.925
HOXB5
Homeobox B5.
   
   0.901
HOXA6
Homeobox A6.
   
   0.891
HOXB7
Homeobox B7.
   
 
 0.823
HOXA7
Homeobox A7.
   
 
 0.768
HOXD4
Homeobox D4.
   
 
 0.716
HOXB6
Homeobox B6.
   
   0.697
HOXB4
Homeobox B4.
   
 
 0.685
FOXP1
Forkhead box P1.
      
 0.612
HOXA4
Homeobox A4.
   
   0.558
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.