Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPATA6Spermatogenesis associated 6. (488 aa)    
Predicted Functional Partners:
RSPH1
Radial spoke head component 1.
   
  
 0.859
PMFBP1
Polyamine modulated factor 1 binding protein 1.
    
 
 0.723
SUN5
Sad1 and UNC84 domain containing 5.
      
 0.698
CNTLN
Centlein.
      
 0.697
ENSNVIP00000007424
Cilia and flagella associated protein 52.
   
  
 0.679
TSSK4
Testis specific serine kinase 4.
   
  
 0.676
ENSNVIP00000030212
annotation not available
   
  
 0.660
CFAP100
Cilia and flagella associated protein 100.
      
 0.609
CATSPERD
Cation channel sperm associated auxiliary subunit delta.
      
 0.594
SPATA46
Spermatogenesis associated 46.
      
 0.592
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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