Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTBP1Polypyrimidine tract binding protein 1. (558 aa)    
Predicted Functional Partners:
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
 0.945
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.940
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.929
ENSNVIP00000018263
annotation not available
   
 0.891
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
   
 0.850
ENSNVIP00000030070
annotation not available
   
 0.850
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L like.
   
 0.847
QKI
QKI, KH domain containing RNA binding.
   
 
 0.842
ENSNVIP00000030895
annotation not available
   
 0.840
ELAVL1
ELAV like RNA binding protein 1.
   
 0.826
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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