STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CXXC1CXXC finger protein 1. (655 aa)    
Predicted Functional Partners:
WDR82
WD repeat domain 82.
   
 0.997
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.994
SETD1B
SET domain containing 1B, histone lysine methyltransferase.
   
 0.986
ENSNVIP00000004964
annotation not available
   
 0.982
ENSNVIP00000014314
annotation not available
   
 0.982
SETD1A
SET domain containing 1A, histone lysine methyltransferase.
   
 0.976
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.965
ENSNVIP00000018315
WD repeat domain 5B.
    
 0.963
ENSNVIP00000023939
WD repeat domain 5.
    
 0.963
HCFC2
Host cell factor C2.
   
 0.919
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.