ENSNVIP00000003109 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

ENSNVIP00000003109

annotation not available (216 aa)

Predicted Functional Partners:

UBE2I

0.816

ENSNVIP00000001995

0.728

SUMO1

0.728

CBX5

0.690

PML

0.682

ENSNVIP00000007536

0.608

ENSNVIP00000029128

0.608

RANBP2

0.574

CBX1

0.480

SUGCT

0.472

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBX1	CBX5	ENSNVIP00000007460	ENSNVIP00000003072	Chromobox 1.	Chromobox 5.	0.942
CBX1	ENSNVIP00000003109	ENSNVIP00000007460	ENSNVIP00000003109	Chromobox 1.	annotation not available	0.480
CBX5	CBX1	ENSNVIP00000003072	ENSNVIP00000007460	Chromobox 5.	Chromobox 1.	0.942
CBX5	ENSNVIP00000003109	ENSNVIP00000003072	ENSNVIP00000003109	Chromobox 5.	annotation not available	0.690
ENSNVIP00000001995	ENSNVIP00000003109	ENSNVIP00000001995	ENSNVIP00000003109	annotation not available	annotation not available	0.728
ENSNVIP00000001995	PML	ENSNVIP00000001995	ENSNVIP00000016012	annotation not available	Promyelocytic leukemia.	0.911
ENSNVIP00000001995	RANBP2	ENSNVIP00000001995	ENSNVIP00000013980	annotation not available	RAN binding protein 2.	0.956
ENSNVIP00000001995	UBE2I	ENSNVIP00000001995	ENSNVIP00000024001	annotation not available	Ubiquitin conjugating enzyme E2 I.	0.985
ENSNVIP00000003109	CBX1	ENSNVIP00000003109	ENSNVIP00000007460	annotation not available	Chromobox 1.	0.480
ENSNVIP00000003109	CBX5	ENSNVIP00000003109	ENSNVIP00000003072	annotation not available	Chromobox 5.	0.690
ENSNVIP00000003109	ENSNVIP00000001995	ENSNVIP00000003109	ENSNVIP00000001995	annotation not available	annotation not available	0.728
ENSNVIP00000003109	ENSNVIP00000007536	ENSNVIP00000003109	ENSNVIP00000007536	annotation not available	annotation not available	0.608
ENSNVIP00000003109	ENSNVIP00000029128	ENSNVIP00000003109	ENSNVIP00000029128	annotation not available	annotation not available	0.608
ENSNVIP00000003109	PML	ENSNVIP00000003109	ENSNVIP00000016012	annotation not available	Promyelocytic leukemia.	0.682
ENSNVIP00000003109	RANBP2	ENSNVIP00000003109	ENSNVIP00000013980	annotation not available	RAN binding protein 2.	0.574
ENSNVIP00000003109	SUGCT	ENSNVIP00000003109	ENSNVIP00000010550	annotation not available	succinyl-CoA:glutarate-CoA transferase.	0.472
ENSNVIP00000003109	SUMO1	ENSNVIP00000003109	ENSNVIP00000009745	annotation not available	Small ubiquitin like modifier 1.	0.728
ENSNVIP00000003109	UBE2I	ENSNVIP00000003109	ENSNVIP00000024001	annotation not available	Ubiquitin conjugating enzyme E2 I.	0.816
ENSNVIP00000007536	ENSNVIP00000003109	ENSNVIP00000007536	ENSNVIP00000003109	annotation not available	annotation not available	0.608
ENSNVIP00000029128	ENSNVIP00000003109	ENSNVIP00000029128	ENSNVIP00000003109	annotation not available	annotation not available	0.608