STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCAMP1Secretory carrier membrane protein 1. (338 aa)    
Predicted Functional Partners:
SCAMP2
Secretory carrier membrane protein 2.
    
   0.863
SCAMP3
Secretory carrier membrane protein 3.
   
   0.838
FYCO1
FYVE and coiled-coil domain containing 1.
      
 0.729
ITM2B
Integral membrane protein 2B.
    
 
 0.606
ENSNVIP00000009318
Vesicle transport through interaction with t-SNAREs 1A.
   
  
 0.562
ENSNVIP00000017658
annotation not available
   
 
 0.562
VAMP8
Vesicle associated membrane protein 8.
    
 
 0.552
CHP1
Calcineurin like EF-hand protein 1.
      
 0.537
ST8SIA2
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2.
      
 0.508
ERBIN
Erbb2 interacting protein.
      
 0.488
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.