STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRP54Signal recognition particle 54. (504 aa)    
Predicted Functional Partners:
SRP68
Signal recognition particle 68.
   
 0.999
SRP72
Signal recognition particle 72.
   
 0.999
SRP9
Signal recognition particle 9.
   
 0.999
SRP19
Signal recognition particle 19.
   
 0.992
ENSNVIP00000029964
annotation not available
   
 0.992
ENSNVIP00000006724
annotation not available
    
 0.985
SRP14
Signal recognition particle 14.
    
 0.985
SRPRA
SRP receptor subunit alpha.
  
 0.958
ENSNVIP00000022021
annotation not available
   
 0.943
SEC63
SEC63 homolog, protein translocation regulator.
   
  
 0.927
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.