Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB3DRAB3D, member RAS oncogene family. (219 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.975
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
    
 0.831
RAB8A
RAB8A, member RAS oncogene family.
   
  0.780
RAB27B
RAB27B, member RAS oncogene family.
     
  0.780
RAB8B
RAB8B, member RAS oncogene family.
   
  0.780
RAB11A
RAB11A, member RAS oncogene family.
   
  0.778
RAB11B
RAB11B, member RAS oncogene family.
   
  0.778
RAB27A
RAB27A, member RAS oncogene family.
     
  0.757
SYTL4
Synaptotagmin like 4.
   
 0.734
SYT1
Synaptotagmin 1.
   
 0.716
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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