STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCAMMelanoma cell adhesion molecule. (645 aa)    
Predicted Functional Partners:
LAMA4
Laminin subunit alpha 4.
   
 0.944
CNTN1
Contactin 1.
    
  0.882
ATP6V0A2
ATPase H+ transporting V0 subunit a2.
    
  0.842
ATP6V0A1
ATPase H+ transporting V0 subunit a1.
    
  0.841
NECTIN3
Nectin cell adhesion molecule 3.
    
 0.613
LAMA3
Laminin subunit alpha 3.
   
 0.602
LAMA5
Laminin subunit alpha 5.
   
 0.602
LGALS8
Galectin 8.
    
 0.585
LGALS12
Galectin 12.
    
 0.585
NECTIN1
Nectin cell adhesion molecule 1.
    
 0.576
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.