ENSNVIP00000003333 protein (Neovison vison) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNVIP00000003333

annotation not available (362 aa)

Predicted Functional Partners:

TMEM82

0.720

WASL

0.658

WAS

0.658

TEX43

0.642

GFRA1

0.640

SPATS1

0.640

CFAP100

0.636

STRA8

0.615

NTAN1

0.614

SPEM1

0.612

Your Current Organism:

Neovison vison

NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CFAP100	ENSNVIP00000003333	ENSNVIP00000021235	ENSNVIP00000003333	Cilia and flagella associated protein 100.	annotation not available	0.636
CFAP100	TEX43	ENSNVIP00000021235	ENSNVIP00000009125	Cilia and flagella associated protein 100.	Testis expressed 43.	0.640
ENSNVIP00000003333	CFAP100	ENSNVIP00000003333	ENSNVIP00000021235	annotation not available	Cilia and flagella associated protein 100.	0.636
ENSNVIP00000003333	GFRA1	ENSNVIP00000003333	ENSNVIP00000005492	annotation not available	GDNF family receptor alpha 1.	0.640
ENSNVIP00000003333	NTAN1	ENSNVIP00000003333	ENSNVIP00000025074	annotation not available	N-terminal asparagine amidase.	0.614
ENSNVIP00000003333	SPATS1	ENSNVIP00000003333	ENSNVIP00000011742	annotation not available	Spermatogenesis associated serine rich 1.	0.640
ENSNVIP00000003333	SPEM1	ENSNVIP00000003333	ENSNVIP00000003931	annotation not available	Spermatid maturation 1.	0.612
ENSNVIP00000003333	STRA8	ENSNVIP00000003333	ENSNVIP00000029339	annotation not available	Stimulated by retinoic acid 8.	0.615
ENSNVIP00000003333	TEX43	ENSNVIP00000003333	ENSNVIP00000009125	annotation not available	Testis expressed 43.	0.642
ENSNVIP00000003333	TMEM82	ENSNVIP00000003333	ENSNVIP00000014923	annotation not available	Transmembrane protein 82.	0.720
ENSNVIP00000003333	WAS	ENSNVIP00000003333	ENSNVIP00000008277	annotation not available	WASP actin nucleation promoting factor.	0.658
ENSNVIP00000003333	WASL	ENSNVIP00000003333	ENSNVIP00000001279	annotation not available	WASP like actin nucleation promoting factor.	0.658
GFRA1	ENSNVIP00000003333	ENSNVIP00000005492	ENSNVIP00000003333	GDNF family receptor alpha 1.	annotation not available	0.640
GFRA1	STRA8	ENSNVIP00000005492	ENSNVIP00000029339	GDNF family receptor alpha 1.	Stimulated by retinoic acid 8.	0.552
NTAN1	ENSNVIP00000003333	ENSNVIP00000025074	ENSNVIP00000003333	N-terminal asparagine amidase.	annotation not available	0.614
NTAN1	TMEM82	ENSNVIP00000025074	ENSNVIP00000014923	N-terminal asparagine amidase.	Transmembrane protein 82.	0.714
SPATS1	ENSNVIP00000003333	ENSNVIP00000011742	ENSNVIP00000003333	Spermatogenesis associated serine rich 1.	annotation not available	0.640
SPEM1	ENSNVIP00000003333	ENSNVIP00000003931	ENSNVIP00000003333	Spermatid maturation 1.	annotation not available	0.612
SPEM1	TEX43	ENSNVIP00000003931	ENSNVIP00000009125	Spermatid maturation 1.	Testis expressed 43.	0.434
STRA8	ENSNVIP00000003333	ENSNVIP00000029339	ENSNVIP00000003333	Stimulated by retinoic acid 8.	annotation not available	0.615