STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLCO1C1Solute carrier organic anion transporter family member 1C1. (727 aa)    
Predicted Functional Partners:
LIX1
Limb and CNS expressed 1.
   
  
 0.674
ENSNVIP00000010389
annotation not available
   
  
 0.658
FADS6
Fatty acid desaturase 6.
      
 0.654
SLC16A10
Solute carrier family 16 member 10.
   
 
 0.646
SLC16A2
Solute carrier family 16 member 2.
   
 
 0.646
UPRT
Uracil phosphoribosyltransferase homolog.
      
 0.611
ENSNVIP00000029057
Solute carrier family 7 member 1.
   
  
 0.607
NTSR2
Neurotensin receptor 2.
   
  
 0.548
APCDD1
APC down-regulated 1.
      
 0.522
LSM5
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated.
      
 0.516
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.