STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATL2Atlastin GTPase 2. (413 aa)    
Predicted Functional Partners:
RTN2
Reticulon 2.
    
 
 0.580
RTN3
Reticulon 3.
    
 
 0.575
SPAST
Spastin.
   
 
 0.575
RTN4
Reticulon 4.
    
 
 0.561
ARL14
ADP ribosylation factor like GTPase 14.
   
 
 0.549
ENSNVIP00000000409
annotation not available
    
 
 0.537
ENSNVIP00000023657
annotation not available
    
 
 0.537
RTN1
Reticulon 1.
    
 
 0.523
ENSNVIP00000028682
Katanin catalytic subunit A1.
   
 
 0.519
NUCB1
Nucleobindin 1.
      
 0.510
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.