STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000003372annotation not available (295 aa)    
Predicted Functional Partners:
ENSNVIP00000002713
annotation not available
      
 0.754
ENSNVIP00000019200
annotation not available
      
 0.754
CLN6
CLN6 transmembrane ER protein.
      
 0.754
PPT1
Palmitoyl-protein thioesterase 1.
      
 0.753
TLCD3B
TLC domain containing 3B.
      
 0.715
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.663
MFSD8
Major facilitator superfamily domain containing 8.
      
 0.615
ENSNVIP00000008999
annotation not available
      
 0.595
TPP1
Tripeptidyl peptidase 1.
    
 
 0.594
ATXN7L3B
Ataxin 7 like 3B.
      
 0.564
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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