STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZMAT5Zinc finger matrin-type 5. (170 aa)    
Predicted Functional Partners:
RNPC3
RNA binding region (RNP1, RRM) containing 3.
   
 0.997
ZCRB1
Zinc finger CCHC-type and RNA binding motif containing 1.
    
 0.993
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
   
 0.983
SNRNP48
Small nuclear ribonucleoprotein U11/U12 subunit 48.
    
 0.981
ENSNVIP00000027125
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.976
PDCD7
Programmed cell death 7.
   
 0.965
SF3B1
Splicing factor 3b subunit 1.
   
 0.955
ZRSR2
Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2.
   
 0.955
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.953
SNRNP25
Small nuclear ribonucleoprotein U11/U12 subunit 25.
   
 0.949
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.