STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH2D4BSH2 domain containing 4B. (431 aa)    
Predicted Functional Partners:
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
    
 
 0.838
ENSNVIP00000023033
annotation not available
    
   0.829
DBNL
Drebrin like.
    
 
 0.689
PALM2AKAP2
PALM2 and AKAP2 fusion.
      
 0.639
PIWIL1
Piwi like RNA-mediated gene silencing 1.
      
 0.637
DBN1
Drebrin 1.
    
 
 0.610
POLR3A
RNA polymerase III subunit A.
      
 0.608
ENSNVIP00000028003
FCH and double SH3 domains 2.
      
 0.560
PDZRN3
PDZ domain containing ring finger 3.
      
 0.558
DYDC1
DPY30 domain containing 1.
    
 
 0.556
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.