Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSNVIP00000003433Retinol binding protein 4. (201 aa)    
Predicted Functional Partners:
ENSNVIP00000025215
Transthyretin.
   
 0.991
ENSNVIP00000016090
annotation not available
     
 0.937
ENSNVIP00000014601
annotation not available
   
 0.892
ENSNVIP00000021219
Retinol binding protein 1.
   
 
 0.762
ENSNVIP00000007989
arginyl-tRNA synthetase 1.
      
 0.735
GC
GC vitamin D binding protein.
   
  
 0.709
ENSNVIP00000030387
RNA polymerase III subunit D.
    
   0.628
MSRB2
Methionine sulfoxide reductase B2.
    
 
 0.597
ENSNVIP00000011393
Methionine sulfoxide reductase B3.
    
 
 0.597
ENSNVIP00000009223
annotation not available
   
  
 0.585
Your Current Organism:
Neovison vison
NCBI taxonomy Id: 452646
Other names: American mink, Mustela vison, N. vison, mink
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